
Qian Lin
Assistant Professor
Campus
St. George (downtown)
CSB Appointment
Full
Research Areas
Bioinformatics / Computational Biology, Neurobiology
Education
Ph.D National University of Singapore (NUS) 2016
BSc University of Science and Technology of China (USTC) 2011
Graduate Programs
Cell and Systems Biology
Research Description
Our lab wants to understand how the brain produces flexible and adaptive behaviors – the neural mechanisms underlying cognition and behaviors at the systems level. To do so, we combine whole-brain neural imaging and computational tools on behaving animal models. To gain access to the whole brain at the single-cell level, we work with the zebrafish model and cutting-edge microscopies. Our approach is to develop data-driven computational models that can explain and predict behaviors from neural activity.
The cerebellum, with a highly conserved layered architecture, has recently emerged as a critical region for cognitive functions. Our lab focuses on the “cognitive cerebellum” by studying cerebellar microcircuits and interactions with the brain-wide neurodynamics in three decision-making contexts – learning, social cognition, and spatial navigation. We employ state-of-art optical neurotechnology, virtual realities, calcium imaging in awake zebrafish, computation tools from machine learning and dynamical systems, and an array of optogenetic tools.
Contact Information
Office: 603A
Lab: 603/604
Email
Mailing Address
25 Harbord Street,
Toronto, Ontario,
M5S 3G5
Recent News
April 2, 2026
A year of deep research leads to a culminating event for fourth year students
Fourth year students in CSB can join our research laboratories to conduct projects in their favourite topic as part of CSB497, 498 or 499 courses.…
December 15, 2025
Congratulations to CSB’s talented 2025-2026 graduate award recipients!
Graduate students in the Department of Cell & Systems Biology cover a broad range of fields, including plant science, neuroscience, cell biology,…
April 17, 2024
Undergraduate researchers reveal exciting project results at year-end poster session to earn F Michael Barrett Award
On Friday, April 5th, 2024 students from the CSB497, 498 and 499 independent research programs presented their project results in a poster session…
Publications
2025
Altered locomotion and anxiety after exposure to SiO nanoparticles in larval zebrafish.
Shen PY, Wu J, Pu G, Huang K, Lin Q
2025, Scientific reports, 15, 18229, 40414979
2020
Cerebellar Neurodynamics Predict Decision Timing and Outcome on the Single-Trial Level
Lin Q, Manley J, Helmreich M, Schlumm F, Li JM, Robson DN, Engert F, Schier A, Nöbauer T, Vaziri A
2020, Cell, 10.1016/j.cell.2019.12.018
2017
Characterization of a thalamic nucleus mediating habenula responses to changes in ambient illumination
Cheng R, Krishnan S, Lin Q, Kibat C, Jesuthasan S
2017, BMC Biology, 10.1186/s12915-017-0431-1
